Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cstf3Q99LI7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cstf3Q99LI7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm36970-201ENSMUST00000193688 1859 ntBASIC12□□□□□ -0.49
Cstf3Q99LI7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12□□□□□ -0.49
Cstf3Q99LI7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm12390-201ENSMUST00000117897 397 ntBASIC12□□□□□ -0.49
Cstf3Q99LI7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12□□□□□ -0.49
Cstf3Q99LI7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cstf3Q99LI7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cstf3Q99LI7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm8706-201ENSMUST00000197372 1491 ntBASIC12□□□□□ -0.49
Cstf3Q99LI7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm8131-201ENSMUST00000213783 1570 ntBASIC12□□□□□ -0.49
Cstf3Q99LI7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12□□□□□ -0.49
Cstf3Q99LI7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cstf3Q99LI7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms