Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm37922-201ENSMUST00000195596 455 ntBASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm24526-201ENSMUST00000082921 158 ntBASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thumpd1Q99J36 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Gm8213-201ENSMUST00000118191 441 ntBASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Gm16479-201ENSMUST00000121706 932 ntBASIC11.04□□□□□ -0.64
Thumpd1Q99J36 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Gm4034-201ENSMUST00000187674 480 ntBASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Gm44872-201ENSMUST00000207864 420 ntBASIC11.04□□□□□ -0.64
Thumpd1Q99J36 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms