Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb18Q91Y02 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm11331-201ENSMUST00000119764 288 ntBASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm24749-201ENSMUST00000157838 343 ntBASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm17812-201ENSMUST00000204935 318 ntBASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm39404-201ENSMUST00000216350 313 ntBASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb18Q91Y02 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Gm12286-201ENSMUST00000119246 1002 ntBASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Gm43947-201ENSMUST00000203019 959 ntBASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Gm18730-201ENSMUST00000218038 343 ntBASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb18Q91Y02 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb18Q91Y02 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms