Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Atp6v1h-205ENSMUST00000192847 1662 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Gimap4-203ENSMUST00000118802 771 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Gm13754-201ENSMUST00000120486 998 ntBASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 AC154627.1-201ENSMUST00000228799 1286 ntBASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb20Q91XZ9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm14807-201ENSMUST00000116640 983 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm12957-201ENSMUST00000117835 377 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm6620-201ENSMUST00000120113 715 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm31123-201ENSMUST00000192094 666 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm6458-201ENSMUST00000211573 635 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 AC108945.1-201ENSMUST00000226477 94 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms