Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm22058-201ENSMUST00000083393 310 ntBASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm23270-201ENSMUST00000104055 131 ntBASIC14.28□□□□□ -0.12
Ddx41Q91VN6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.28□□□□□ -0.12
Ddx41Q91VN6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Mir433-201ENSMUST00000093564 124 ntBASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx41Q91VN6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.27□□□□□ -0.12
Ddx41Q91VN6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.27□□□□□ -0.12
Ddx41Q91VN6 Gm24830-201ENSMUST00000102024 166 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm25890-201ENSMUST00000177643 165 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm22614-201ENSMUST00000178300 165 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm18827-201ENSMUST00000188341 790 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm22042-201ENSMUST00000082989 165 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm26232-201ENSMUST00000083360 166 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm24136-201ENSMUST00000083374 165 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Gm26110-201ENSMUST00000083971 165 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx41Q91VN6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms