Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.57□□□□□ -0.4
Rpa1Q8VEE4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Gm29667-201ENSMUST00000190817 490 ntBASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Gm42599-201ENSMUST00000201308 469 ntBASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpa1Q8VEE4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm15371-201ENSMUST00000117057 784 ntBASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm14760-201ENSMUST00000121831 999 ntBASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm24694-201ENSMUST00000180054 110 ntBASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm27663-201ENSMUST00000184839 110 ntBASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.55□□□□□ -0.4
Rpa1Q8VEE4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms