Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm15276-201ENSMUST00000145953 498 ntBASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm27046-201ENSMUST00000182160 463 ntBASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndc1Q8VCB1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm12997-201ENSMUST00000120207 640 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm27023-201ENSMUST00000182372 285 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm38317-201ENSMUST00000195564 343 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm13097-201ENSMUST00000210722 397 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.74□□□□□ -0.53
Ndc1Q8VCB1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm16570-201ENSMUST00000161951 436 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms