Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Gm8805-201ENSMUST00000117848 313 ntBASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf8Q8VC56 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf8Q8VC56 Daam2-202ENSMUST00000224595 1926 ntBASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf8Q8VC56 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Gm11425-201ENSMUST00000119608 498 ntBASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Gm27731-201ENSMUST00000185192 107 ntBASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Gm10146-201ENSMUST00000072739 309 ntBASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Gm9396-201ENSMUST00000076703 567 ntBASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms