Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Gm36940-201ENSMUST00000194281 2036 ntBASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Gm13823-201ENSMUST00000119930 345 ntBASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Gm6222-201ENSMUST00000120787 396 ntBASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ccdc9Q8VC31 Gm43143-201ENSMUST00000196083 2023 ntBASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gm5566-201ENSMUST00000116118 459 ntBASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gm15693-201ENSMUST00000120470 637 ntBASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gm38192-201ENSMUST00000194364 1847 ntBASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc9Q8VC31 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Mir449b-201ENSMUST00000104833 80 ntBASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Gm18766-201ENSMUST00000189811 808 ntBASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Gm18027-201ENSMUST00000218947 619 ntBASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc9Q8VC31 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms