Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nup35Q8R4R6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Nup35Q8R4R6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup35Q8R4R6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm37935-201ENSMUST00000192012 982 ntBASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.11□□□□□ -0.79
Nup35Q8R4R6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.11□□□□□ -0.79
Nup35Q8R4R6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm17208-201ENSMUST00000168388 535 ntBASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Mir6956-201ENSMUST00000183598 62 ntBASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm44882-201ENSMUST00000205702 802 ntBASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm24136-201ENSMUST00000083374 165 ntBASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms