Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lin28aQ8K3Y3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm24830-201ENSMUST00000102024 166 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm25890-201ENSMUST00000177643 165 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm22614-201ENSMUST00000178300 165 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm28882-201ENSMUST00000185504 314 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm22042-201ENSMUST00000082989 165 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm26232-201ENSMUST00000083360 166 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm24136-201ENSMUST00000083374 165 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Gm26110-201ENSMUST00000083971 165 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lin28aQ8K3Y3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Gm12314-201ENSMUST00000118104 538 ntBASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Gm14832-201ENSMUST00000121289 322 ntBASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lin28aQ8K3Y3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms