Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CopaQ8CIE6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.71□□□□□ -0.37
CopaQ8CIE6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Gm13316-201ENSMUST00000140537 691 ntBASIC12.71□□□□□ -0.37
CopaQ8CIE6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Gm26083-201ENSMUST00000157904 193 ntBASIC12.71□□□□□ -0.37
CopaQ8CIE6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Morn2-202ENSMUST00000227729 656 ntBASIC12.71□□□□□ -0.37
CopaQ8CIE6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.71□□□□□ -0.37
CopaQ8CIE6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CopaQ8CIE6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CopaQ8CIE6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CopaQ8CIE6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CopaQ8CIE6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm15236-201ENSMUST00000117309 379 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm18056-201ENSMUST00000207670 568 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm18061-201ENSMUST00000208350 562 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm18063-201ENSMUST00000208529 568 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm18052-201ENSMUST00000208750 559 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm21769-201ENSMUST00000211922 111 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Daam2-202ENSMUST00000224595 1926 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.7□□□□□ -0.38
CopaQ8CIE6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CopaQ8CIE6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CopaQ8CIE6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CopaQ8CIE6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 146.6 ms