Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.14□□□□□ -0.47
Rab43Q8CG50 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.14□□□□□ -0.47
Rab43Q8CG50 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Gm18304-201ENSMUST00000189162 546 ntBASIC12.14□□□□□ -0.47
Rab43Q8CG50 AU022133-201ENSMUST00000200601 873 ntBASIC12.14□□□□□ -0.47
Rab43Q8CG50 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.14□□□□□ -0.47
Rab43Q8CG50 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.14□□□□□ -0.47
Rab43Q8CG50 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab43Q8CG50 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Rubie-203ENSMUST00000227803 2430 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12616-201ENSMUST00000118594 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12624-201ENSMUST00000177615 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12621-201ENSMUST00000177760 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12615-201ENSMUST00000177970 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12622-201ENSMUST00000177975 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12627-201ENSMUST00000178412 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12625-201ENSMUST00000179122 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12614-201ENSMUST00000179586 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm12613-201ENSMUST00000180323 382 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm5523-201ENSMUST00000180415 997 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm44100-201ENSMUST00000204329 436 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm7848-201ENSMUST00000210739 718 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Spcs1-203ENSMUST00000226374 592 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.13□□□□□ -0.47
Rab43Q8CG50 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab43Q8CG50 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab43Q8CG50 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab43Q8CG50 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms