Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brf1Q8CFK2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Gm30285-201ENSMUST00000214614 422 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.97□□□□□ -0.01
Brf1Q8CFK2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Mir1938-201ENSMUST00000158746 100 ntBASIC14.96□□□□□ -0.01
Brf1Q8CFK2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Gm28882-201ENSMUST00000185504 314 ntBASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.96□□□□□ -0.01
Brf1Q8CFK2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Gm45865-201ENSMUST00000211815 945 ntBASIC14.96□□□□□ -0.01
Brf1Q8CFK2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Brf1Q8CFK2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Brf1Q8CFK2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.96□□□□□ -0.02
Brf1Q8CFK2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Brf1Q8CFK2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Brf1Q8CFK2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Brf1Q8CFK2 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.95□□□□□ -0.02
Brf1Q8CFK2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Gm15198-201ENSMUST00000117283 177 ntBASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Gm14832-201ENSMUST00000121289 322 ntBASIC14.95□□□□□ -0.02
Brf1Q8CFK2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Gm45331-201ENSMUST00000209868 554 ntBASIC14.95□□□□□ -0.02
Brf1Q8CFK2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.95□□□□□ -0.02
Brf1Q8CFK2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms