Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc38Q8CDN8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ccdc38Q8CDN8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.83□□□□□ -0.19
Ccdc38Q8CDN8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc38Q8CDN8 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc38Q8CDN8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc38Q8CDN8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc38Q8CDN8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gm11597-201ENSMUST00000121423 964 ntBASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gm27243-201ENSMUST00000183964 521 ntBASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gm8227-201ENSMUST00000223306 571 ntBASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc38Q8CDN8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Gm40466-201ENSMUST00000212174 422 ntBASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc38Q8CDN8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms