Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc87Q8CDL9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Gm11618-201ENSMUST00000117946 267 ntBASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Gm27731-201ENSMUST00000185192 107 ntBASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Gm40466-201ENSMUST00000212174 422 ntBASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc87Q8CDL9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Gm13369-201ENSMUST00000119442 987 ntBASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Gm15703-201ENSMUST00000120250 880 ntBASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Gm23363-201ENSMUST00000175024 79 ntBASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Gm37922-201ENSMUST00000195596 455 ntBASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc87Q8CDL9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc87Q8CDL9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms