Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Shisa4Q8CA71 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa4Q8CA71 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa4Q8CA71 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa4Q8CA71 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa4Q8CA71 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Rprl1-202ENSMUST00000198476 238 ntBASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Gm8913-201ENSMUST00000209491 641 ntBASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.36□□□□□ -0.11
Shisa4Q8CA71 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Gm12217-201ENSMUST00000118858 696 ntBASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Gm14208-201ENSMUST00000119645 678 ntBASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.35□□□□□ -0.11
Shisa4Q8CA71 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Map1b-203ENSMUST00000223725 2669 ntBASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa4Q8CA71 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.34□□□□□ -0.11
Shisa4Q8CA71 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.34□□□□□ -0.11
Shisa4Q8CA71 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.34□□□□□ -0.11
Shisa4Q8CA71 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa4Q8CA71 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms