Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm16397-201ENSMUST00000122201 494 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm23085-201ENSMUST00000157849 293 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm6485-201ENSMUST00000160676 439 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Gm22920-201ENSMUST00000102175 109 ntBASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Gm9022-201ENSMUST00000182482 992 ntBASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a6Q8C6K9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a6Q8C6K9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms