Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm13297-201ENSMUST00000120205 934 ntBASIC11.71□□□□□ -0.53
Ska3Q8C263 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.71□□□□□ -0.53
Ska3Q8C263 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Gm27023-201ENSMUST00000182372 285 ntBASIC11.71□□□□□ -0.53
Ska3Q8C263 Gm27501-201ENSMUST00000183599 107 ntBASIC11.71□□□□□ -0.53
Ska3Q8C263 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.71□□□□□ -0.53
Ska3Q8C263 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.71□□□□□ -0.53
Ska3Q8C263 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.71□□□□□ -0.53
Ska3Q8C263 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ska3Q8C263 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.71□□□□□ -0.54
Ska3Q8C263 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ska3Q8C263 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Ska3Q8C263 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ska3Q8C263 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska3Q8C263 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Gm13315-201ENSMUST00000120376 991 ntBASIC11.7□□□□□ -0.54
Ska3Q8C263 Gm13342-201ENSMUST00000121055 207 ntBASIC11.7□□□□□ -0.54
Ska3Q8C263 Gm14760-201ENSMUST00000121831 999 ntBASIC11.7□□□□□ -0.54
Ska3Q8C263 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska3Q8C263 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.7□□□□□ -0.54
Ska3Q8C263 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Gm10608-202ENSMUST00000213924 676 ntBASIC11.7□□□□□ -0.54
Ska3Q8C263 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Morn2-202ENSMUST00000227729 656 ntBASIC11.7□□□□□ -0.54
Ska3Q8C263 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.7□□□□□ -0.54
Ska3Q8C263 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Ska3Q8C263 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska3Q8C263 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ska3Q8C263 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Ska3Q8C263 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm12314-201ENSMUST00000118104 538 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm12241-201ENSMUST00000118330 726 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.69□□□□□ -0.54
Ska3Q8C263 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Ska3Q8C263 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.69□□□□□ -0.54
Ska3Q8C263 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm37201-201ENSMUST00000191845 523 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm6007-201ENSMUST00000208170 823 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.69□□□□□ -0.54
Ska3Q8C263 Gm8227-201ENSMUST00000223306 571 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms