Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cps1Q8C196 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC16.38■□□□□ 0.21
Cps1Q8C196 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cps1Q8C196 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Cps1Q8C196 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC16.38■□□□□ 0.21
Cps1Q8C196 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cps1Q8C196 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cps1Q8C196 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cps1Q8C196 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.38■□□□□ 0.21
Cps1Q8C196 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cps1Q8C196 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.38■□□□□ 0.21
Cps1Q8C196 Matn2-206ENSMUST00000228570 2798 ntBASIC16.38■□□□□ 0.21
Cps1Q8C196 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC16.37■□□□□ 0.21
Cps1Q8C196 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Gm6450-201ENSMUST00000200896 574 ntBASIC16.37■□□□□ 0.21
Cps1Q8C196 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Ap3s1-202ENSMUST00000224622 978 ntBASIC16.37■□□□□ 0.21
Cps1Q8C196 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cps1Q8C196 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cps1Q8C196 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm12969-201ENSMUST00000120199 1004 ntBASIC16.36■□□□□ 0.21
Cps1Q8C196 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm9116-201ENSMUST00000192400 1018 ntBASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm43852-201ENSMUST00000202098 917 ntBASIC16.36■□□□□ 0.21
Cps1Q8C196 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm18968-201ENSMUST00000221319 862 ntBASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm6722-201ENSMUST00000221586 390 ntBASIC16.36■□□□□ 0.21
Cps1Q8C196 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm7278-201ENSMUST00000119836 1401 ntBASIC16.36■□□□□ 0.21
Cps1Q8C196 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cps1Q8C196 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cps1Q8C196 Gm15784-201ENSMUST00000120260 1462 ntBASIC16.35■□□□□ 0.21
Cps1Q8C196 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC16.35■□□□□ 0.21
Cps1Q8C196 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC16.35■□□□□ 0.21
Cps1Q8C196 Gm11244-201ENSMUST00000121243 237 ntBASIC16.35■□□□□ 0.21
Cps1Q8C196 Gm9089-201ENSMUST00000122027 526 ntBASIC16.35■□□□□ 0.21
Cps1Q8C196 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 Gm22877-201ENSMUST00000175451 105 ntBASIC16.35■□□□□ 0.21
Cps1Q8C196 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC16.35■□□□□ 0.21
Cps1Q8C196 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 Gm8574-201ENSMUST00000203207 924 ntBASIC16.35■□□□□ 0.21
Cps1Q8C196 Gm18059-201ENSMUST00000208073 580 ntBASIC16.35■□□□□ 0.21
Cps1Q8C196 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 Gm23105-201ENSMUST00000083719 134 ntBASIC16.35■□□□□ 0.21
Cps1Q8C196 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cps1Q8C196 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms