Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Gm24548-201ENSMUST00000158650 108 ntBASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 AY702102-202ENSMUST00000194651 1173 ntBASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Gm43133-201ENSMUST00000197472 463 ntBASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Gm19309-201ENSMUST00000218295 205 ntBASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf3Q8C120 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Gm6023-201ENSMUST00000118217 606 ntBASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Gm27572-201ENSMUST00000183702 255 ntBASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf3Q8C120 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Gm27243-201ENSMUST00000183964 521 ntBASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Gm18054-201ENSMUST00000207539 555 ntBASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Gm39404-201ENSMUST00000216350 313 ntBASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf3Q8C120 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms