Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm12566-201ENSMUST00000121479 359 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm29615-201ENSMUST00000185371 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm28224-201ENSMUST00000186078 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm29001-201ENSMUST00000186177 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm28292-201ENSMUST00000186593 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm28101-201ENSMUST00000187608 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm29076-201ENSMUST00000187689 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm28302-201ENSMUST00000187931 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm28646-201ENSMUST00000188220 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm28205-201ENSMUST00000189177 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm29032-201ENSMUST00000189797 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm28695-201ENSMUST00000190300 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm37448-201ENSMUST00000192795 697 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm37666-201ENSMUST00000194110 866 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm3786-201ENSMUST00000202659 378 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm19994-201ENSMUST00000217086 586 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm18730-201ENSMUST00000218038 343 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Gm14760-201ENSMUST00000121831 999 ntBASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Gm27627-201ENSMUST00000183644 150 ntBASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Gm26035-201ENSMUST00000083065 308 ntBASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh3rf2Q8BZT2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Sh3rf2Q8BZT2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sh3rf2Q8BZT2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sh3rf2Q8BZT2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Sh3rf2Q8BZT2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Gm11989-201ENSMUST00000117240 672 ntBASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Gm11362-201ENSMUST00000118838 850 ntBASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms