Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm9996-201ENSMUST00000070359 913 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm22042-201ENSMUST00000082989 165 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm26232-201ENSMUST00000083360 166 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm26110-201ENSMUST00000083971 165 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.71□□□□□ -0.38
Nup54Q8BTS4 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm14644-201ENSMUST00000116671 647 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm5070-201ENSMUST00000177599 862 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm38241-201ENSMUST00000192641 898 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm4857-201ENSMUST00000192718 785 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm44967-201ENSMUST00000207047 631 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup54Q8BTS4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm6963-201ENSMUST00000147879 379 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm44882-201ENSMUST00000205702 802 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup54Q8BTS4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms