Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn3Q8BHH8 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn3Q8BHH8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms