Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Gm6013-201ENSMUST00000212264 699 ntBASIC14.56□□□□□ -0.08
Samm50Q8BGH2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Samm50Q8BGH2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm22018-201ENSMUST00000104357 131 ntBASIC14.55□□□□□ -0.08
Samm50Q8BGH2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm25261-201ENSMUST00000157416 134 ntBASIC14.55□□□□□ -0.08
Samm50Q8BGH2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm38002-201ENSMUST00000193255 180 ntBASIC14.55□□□□□ -0.08
Samm50Q8BGH2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Samm50Q8BGH2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Map1b-203ENSMUST00000223725 2669 ntBASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Gm12291-201ENSMUST00000121627 311 ntBASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Samm50Q8BGH2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms