Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Sox21Q811W0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.21□□□□□ -0.78
Sox21Q811W0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 Gm26461-201ENSMUST00000175064 290 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Gm8099-201ENSMUST00000200510 742 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.2□□□□□ -0.78
Sox21Q811W0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.2□□□□□ -0.78
Sox21Q811W0 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Mir339-201ENSMUST00000083659 96 ntBASIC10.2□□□□□ -0.78
Sox21Q811W0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sox21Q811W0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox21Q811W0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.2□□□□□ -0.78
Sox21Q811W0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.19□□□□□ -0.78
Sox21Q811W0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sox21Q811W0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sox21Q811W0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.19□□□□□ -0.78
Sox21Q811W0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.19□□□□□ -0.78
Sox21Q811W0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Sox21Q811W0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sox21Q811W0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm25043-201ENSMUST00000158604 212 ntBASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm16570-201ENSMUST00000161951 436 ntBASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm44405-201ENSMUST00000198952 126 ntBASIC10.19□□□□□ -0.78
Sox21Q811W0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sox21Q811W0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Sox21Q811W0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.19□□□□□ -0.78
Sox21Q811W0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.19□□□□□ -0.78
Sox21Q811W0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sox21Q811W0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.19□□□□□ -0.78
Sox21Q811W0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms