Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim50Q810I2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm9630-201ENSMUST00000178304 885 ntBASIC12.11□□□□□ -0.47
Trim50Q810I2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim50Q810I2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim50Q810I2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm10478-201ENSMUST00000084451 396 ntBASIC12.11□□□□□ -0.47
Trim50Q810I2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.11□□□□□ -0.47
Trim50Q810I2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim50Q810I2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim50Q810I2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Gm9022-201ENSMUST00000182482 992 ntBASIC12.1□□□□□ -0.47
Trim50Q810I2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim50Q810I2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim50Q810I2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim50Q810I2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trim50Q810I2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim50Q810I2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Gm12314-201ENSMUST00000118104 538 ntBASIC12.09□□□□□ -0.47
Trim50Q810I2 Gm13875-201ENSMUST00000120162 282 ntBASIC12.09□□□□□ -0.47
Trim50Q810I2 Gm13342-201ENSMUST00000121055 207 ntBASIC12.09□□□□□ -0.47
Trim50Q810I2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim50Q810I2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Trim50Q810I2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim50Q810I2 Gm27243-201ENSMUST00000183964 521 ntBASIC12.09□□□□□ -0.47
Trim50Q810I2 Gm42693-201ENSMUST00000196779 631 ntBASIC12.09□□□□□ -0.47
Trim50Q810I2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim50Q810I2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim50Q810I2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trim50Q810I2 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms