Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc116Q80X53 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm13736-201ENSMUST00000119272 253 ntBASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm23119-201ENSMUST00000158610 140 ntBASIC12.18□□□□□ -0.46
Ccdc116Q80X53 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc116Q80X53 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Gm18304-201ENSMUST00000189162 546 ntBASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Gm39404-201ENSMUST00000216350 313 ntBASIC12.17□□□□□ -0.46
Ccdc116Q80X53 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.17□□□□□ -0.46
Ccdc116Q80X53 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc116Q80X53 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms