Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
Prpf40bQ80W14 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40bQ80W14 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Prpf40bQ80W14 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40bQ80W14 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40bQ80W14 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40bQ80W14 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf40bQ80W14 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.36□□□□□ -0.11
Prpf40bQ80W14 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Gm22121-201ENSMUST00000175148 54 ntBASIC14.36□□□□□ -0.11
Prpf40bQ80W14 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Gm22058-201ENSMUST00000083393 310 ntBASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Daam2-202ENSMUST00000224595 1926 ntBASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf40bQ80W14 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Gm12058-201ENSMUST00000118614 437 ntBASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Gm6407-201ENSMUST00000176468 549 ntBASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Gm8285-201ENSMUST00000208293 759 ntBASIC14.35□□□□□ -0.11
Prpf40bQ80W14 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf40bQ80W14 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf40bQ80W14 Gm18734-201ENSMUST00000172937 808 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms