Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf38bQ80SY5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.08□□□□□ -0.31
Prpf38bQ80SY5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm12363-201ENSMUST00000122250 668 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm17040-202ENSMUST00000170597 889 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm8738-201ENSMUST00000172606 329 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm25951-201ENSMUST00000175330 64 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf38bQ80SY5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Gm13996-201ENSMUST00000118456 430 ntBASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Gm11667-201ENSMUST00000119828 486 ntBASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Gm19459-201ENSMUST00000176240 835 ntBASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms