Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gm21854-201ENSMUST00000179901 471 ntBASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Rnf220Q6PDX6 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Rnf220Q6PDX6 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf220Q6PDX6 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf220Q6PDX6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf220Q6PDX6 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Gm12485-201ENSMUST00000119641 291 ntBASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Gm9522-201ENSMUST00000182394 926 ntBASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Gm38144-201ENSMUST00000192790 465 ntBASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rnf220Q6PDX6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Gm19184-201ENSMUST00000196798 928 ntBASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf220Q6PDX6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms