Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Gm13316-201ENSMUST00000140537 691 ntBASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Gm44364-201ENSMUST00000198368 141 ntBASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.5□□□□□ -0.09
Smarcc2Q6PDG5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Gm23119-201ENSMUST00000158610 140 ntBASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Gm2991-201ENSMUST00000173338 480 ntBASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Cts7-204ENSMUST00000225321 1257 ntBASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Gm22058-201ENSMUST00000083393 310 ntBASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Smarcc2Q6PDG5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Gm13736-201ENSMUST00000119272 253 ntBASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 Gm18304-201ENSMUST00000189162 546 ntBASIC14.48□□□□□ -0.09
Smarcc2Q6PDG5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms