Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm9204-201ENSMUST00000212641 947 ntBASIC11.34□□□□□ -0.59
VcanQ62059 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VcanQ62059 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.34□□□□□ -0.59
VcanQ62059 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.34□□□□□ -0.59
VcanQ62059 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.34□□□□□ -0.59
VcanQ62059 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.34□□□□□ -0.59
VcanQ62059 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VcanQ62059 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Gm12791-201ENSMUST00000120788 655 ntBASIC11.34□□□□□ -0.59
VcanQ62059 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.34□□□□□ -0.59
VcanQ62059 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.34□□□□□ -0.59
VcanQ62059 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VcanQ62059 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VcanQ62059 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
VcanQ62059 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
VcanQ62059 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
VcanQ62059 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.33□□□□□ -0.6
VcanQ62059 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.33□□□□□ -0.6
VcanQ62059 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.33□□□□□ -0.6
VcanQ62059 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.33□□□□□ -0.6
VcanQ62059 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
VcanQ62059 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.33□□□□□ -0.6
VcanQ62059 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.33□□□□□ -0.6
VcanQ62059 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
VcanQ62059 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Gm23439-201ENSMUST00000104292 132 ntBASIC11.33□□□□□ -0.6
VcanQ62059 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.33□□□□□ -0.6
VcanQ62059 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.33□□□□□ -0.6
VcanQ62059 Gm15703-201ENSMUST00000120250 880 ntBASIC11.33□□□□□ -0.6
VcanQ62059 Gm25394-201ENSMUST00000157338 133 ntBASIC11.33□□□□□ -0.6
VcanQ62059 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.33□□□□□ -0.6
VcanQ62059 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.33□□□□□ -0.6
VcanQ62059 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.33□□□□□ -0.6
VcanQ62059 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
VcanQ62059 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.33□□□□□ -0.6
VcanQ62059 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
VcanQ62059 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
VcanQ62059 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.33□□□□□ -0.6
VcanQ62059 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.33□□□□□ -0.6
VcanQ62059 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.33□□□□□ -0.6
VcanQ62059 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
VcanQ62059 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VcanQ62059 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
VcanQ62059 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
VcanQ62059 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
VcanQ62059 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
VcanQ62059 Gm25677-201ENSMUST00000174983 72 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Gm8197-202ENSMUST00000193422 934 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VcanQ62059 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Gm10580-201ENSMUST00000097985 396 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Gm10581-201ENSMUST00000097986 231 ntBASIC11.32□□□□□ -0.6
VcanQ62059 Gm10582-201ENSMUST00000097987 396 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms