Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox17Q61473 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Sox17Q61473 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.62□□□□□ -0.55
Sox17Q61473 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sox17Q61473 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Sox17Q61473 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox17Q61473 Gm15429-201ENSMUST00000151268 798 ntBASIC11.62□□□□□ -0.55
Sox17Q61473 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.62□□□□□ -0.55
Sox17Q61473 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox17Q61473 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.62□□□□□ -0.55
Sox17Q61473 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.62□□□□□ -0.55
Sox17Q61473 Gm16372-201ENSMUST00000073088 450 ntBASIC11.62□□□□□ -0.55
Sox17Q61473 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Sox17Q61473 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.62□□□□□ -0.55
Sox17Q61473 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sox17Q61473 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox17Q61473 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sox17Q61473 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.61□□□□□ -0.55
Sox17Q61473 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.61□□□□□ -0.55
Sox17Q61473 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Mir7684-201ENSMUST00000183858 60 ntBASIC11.61□□□□□ -0.55
Sox17Q61473 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Sox17Q61473 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Sox17Q61473 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox17Q61473 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sox17Q61473 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Sox17Q61473 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sox17Q61473 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Gm13123-201ENSMUST00000122173 492 ntBASIC11.6□□□□□ -0.55
Sox17Q61473 Mir8102-201ENSMUST00000184148 139 ntBASIC11.6□□□□□ -0.55
Sox17Q61473 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox17Q61473 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sox17Q61473 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.6□□□□□ -0.55
Sox17Q61473 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.6□□□□□ -0.55
Sox17Q61473 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox17Q61473 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sox17Q61473 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox17Q61473 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sox17Q61473 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox17Q61473 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms