Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm26448-201ENSMUST00000082446 203 ntBASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm37785-201ENSMUST00000195783 2408 ntBASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm18304-201ENSMUST00000189162 546 ntBASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm44882-201ENSMUST00000205702 802 ntBASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm19994-201ENSMUST00000217086 586 ntBASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc85aQ5SP85 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Gm7666-201ENSMUST00000146631 819 ntBASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Gm9022-201ENSMUST00000182482 992 ntBASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Gm9358-201ENSMUST00000183067 927 ntBASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Mir7686-201ENSMUST00000200604 57 ntBASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Gm45398-201ENSMUST00000210561 165 ntBASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc85aQ5SP85 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc85aQ5SP85 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms