Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm25880-201ENSMUST00000104331 132 ntBASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm15711-201ENSMUST00000118889 535 ntBASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm15881-201ENSMUST00000148792 942 ntBASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.17□□□□□ -0.14
Ccdc88aQ5SNZ0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm11989-201ENSMUST00000117240 672 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm11362-201ENSMUST00000118838 850 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm29155-201ENSMUST00000185910 269 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm13035-201ENSMUST00000117496 342 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm22138-201ENSMUST00000158748 128 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm10774-201ENSMUST00000188689 204 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm18304-201ENSMUST00000189162 546 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88aQ5SNZ0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm45120-201ENSMUST00000208880 408 ntBASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm270-201ENSMUST00000223010 976 ntBASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms