Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm13829-201ENSMUST00000119600 138 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm11425-201ENSMUST00000119608 498 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm25261-201ENSMUST00000157416 134 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm3890-201ENSMUST00000182416 207 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm18187-201ENSMUST00000196476 984 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm9396-201ENSMUST00000076703 567 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Gm11597-201ENSMUST00000121423 964 ntBASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Gm9022-201ENSMUST00000182482 992 ntBASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Gm19184-201ENSMUST00000196798 928 ntBASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Snora73a-201ENSMUST00000082453 205 ntBASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms