Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Gm45342-201ENSMUST00000210903 1363 ntBASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim41Q5NCC3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC21.58■■□□□ 1.05
Trim41Q5NCC3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim41Q5NCC3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Gm45643-201ENSMUST00000211364 1484 ntBASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim41Q5NCC3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Gm9519-201ENSMUST00000206108 1337 ntBASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Gm5385-201ENSMUST00000118988 1559 ntBASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Gm24934-201ENSMUST00000103764 111 ntBASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Gm5257-201ENSMUST00000121823 790 ntBASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Gm18974-201ENSMUST00000221478 1031 ntBASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Gm38346-201ENSMUST00000192379 2639 ntBASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim41Q5NCC3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Gm42840-201ENSMUST00000200303 2251 ntBASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Gm6506-201ENSMUST00000119775 1136 ntBASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Gm14760-201ENSMUST00000121831 999 ntBASIC21.56■■□□□ 1.04
Trim41Q5NCC3 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Gm37720-201ENSMUST00000195497 1241 ntBASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Gm21027-201ENSMUST00000219300 1236 ntBASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trim41Q5NCC3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Gm15711-201ENSMUST00000118889 535 ntBASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim41Q5NCC3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms