Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 AC166359.1-201ENSMUST00000220243 1871 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Gm2128-201ENSMUST00000108009 2560 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 AC154176.2-201ENSMUST00000225376 6429 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Gm13015-201ENSMUST00000118674 204 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Gm44945-201ENSMUST00000206764 1187 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Gm18165-201ENSMUST00000217426 928 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC8.47□□□□□ -1.05
Cops9Q3U898 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cops9Q3U898 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC8.47□□□□□ -1.05
Cops9Q3U898 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
Cops9Q3U898 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.46□□□□□ -1.05
Cops9Q3U898 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 AC154517.2-201ENSMUST00000220829 2458 ntBASIC8.46□□□□□ -1.05
Cops9Q3U898 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Cops9Q3U898 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cops9Q3U898 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
Cops9Q3U898 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cops9Q3U898 Mir686-201ENSMUST00000102174 109 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm15240-201ENSMUST00000118156 720 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm12485-201ENSMUST00000119641 291 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm12201-201ENSMUST00000120657 1234 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm12291-201ENSMUST00000121627 311 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Cops9Q3U898 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC8.46□□□□□ -1.06
Cops9Q3U898 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cops9Q3U898 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm28033-201ENSMUST00000184224 96 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm5312-201ENSMUST00000203728 547 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm20553-201ENSMUST00000204205 844 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC8.46□□□□□ -1.06
Cops9Q3U898 AC098716.1-201ENSMUST00000213527 703 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 AC159114.1-201ENSMUST00000220349 266 ntBASIC8.46□□□□□ -1.06
Cops9Q3U898 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cops9Q3U898 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cops9Q3U898 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cops9Q3U898 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cops9Q3U898 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cops9Q3U898 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cops9Q3U898 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms