Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.81□□□□□ -0.68
Q3U1D9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Q3U1D9 Gm13996-201ENSMUST00000118456 430 ntBASIC10.81□□□□□ -0.68
Q3U1D9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.81□□□□□ -0.68
Q3U1D9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Q3U1D9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Q3U1D9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.81□□□□□ -0.68
Q3U1D9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Gm27341-201ENSMUST00000183570 106 ntBASIC10.81□□□□□ -0.68
Q3U1D9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.81□□□□□ -0.68
Q3U1D9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.81□□□□□ -0.68
Q3U1D9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.81□□□□□ -0.68
Q3U1D9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Q3U1D9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.8□□□□□ -0.68
Q3U1D9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Q3U1D9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Q3U1D9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.8□□□□□ -0.68
Q3U1D9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Q3U1D9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Q3U1D9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Q3U1D9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Q3U1D9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.8□□□□□ -0.68
Q3U1D9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.8□□□□□ -0.68
Q3U1D9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.8□□□□□ -0.68
Q3U1D9 Mir3102-201ENSMUST00000175555 104 ntBASIC10.8□□□□□ -0.68
Q3U1D9 Gm9022-201ENSMUST00000182482 992 ntBASIC10.8□□□□□ -0.68
Q3U1D9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.8□□□□□ -0.68
Q3U1D9 Gm18753-201ENSMUST00000201000 566 ntBASIC10.8□□□□□ -0.68
Q3U1D9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.8□□□□□ -0.68
Q3U1D9 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.8□□□□□ -0.68
Q3U1D9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Q3U1D9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.8□□□□□ -0.68
Q3U1D9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Q3U1D9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.8□□□□□ -0.68
Q3U1D9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Q3U1D9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.79□□□□□ -0.68
Q3U1D9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Q3U1D9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Q3U1D9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.79□□□□□ -0.68
Q3U1D9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Q3U1D9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Q3U1D9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Q3U1D9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Q3U1D9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Q3U1D9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms