Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Khdc4Q3TCX3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm23270-201ENSMUST00000104055 131 ntBASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Khdc4Q3TCX3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Gm11531-201ENSMUST00000117614 555 ntBASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Gm16505-201ENSMUST00000179981 232 ntBASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Rps4l-202ENSMUST00000204242 789 ntBASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Khdc4Q3TCX3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Khdc4Q3TCX3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Khdc4Q3TCX3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Khdc4Q3TCX3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms