Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.2□□□□□ -0.46
Q3KNL4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Q3KNL4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3KNL4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.2□□□□□ -0.46
Q3KNL4 Pck2-205ENSMUST00000226352 2784 ntBASIC12.19□□□□□ -0.46
Q3KNL4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.19□□□□□ -0.46
Q3KNL4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Q3KNL4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Q3KNL4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Q3KNL4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Snord83b-201ENSMUST00000104546 94 ntBASIC12.19□□□□□ -0.46
Q3KNL4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Q3KNL4 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.19□□□□□ -0.46
Q3KNL4 Gm12363-201ENSMUST00000122250 668 ntBASIC12.19□□□□□ -0.46
Q3KNL4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.19□□□□□ -0.46
Q3KNL4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.19□□□□□ -0.46
Q3KNL4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.19□□□□□ -0.46
Q3KNL4 Gm4271-201ENSMUST00000174444 973 ntBASIC12.19□□□□□ -0.46
Q3KNL4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.19□□□□□ -0.46
Q3KNL4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Q3KNL4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.19□□□□□ -0.46
Q3KNL4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.19□□□□□ -0.46
Q3KNL4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.19□□□□□ -0.46
Q3KNL4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.19□□□□□ -0.46
Q3KNL4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3KNL4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.19□□□□□ -0.46
Q3KNL4 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Q3KNL4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Q3KNL4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Q3KNL4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q3KNL4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Q3KNL4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.18□□□□□ -0.46
Q3KNL4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.18□□□□□ -0.46
Q3KNL4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.18□□□□□ -0.46
Q3KNL4 Rmrp-201ENSMUST00000157463 271 ntBASIC12.18□□□□□ -0.46
Q3KNL4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.18□□□□□ -0.46
Q3KNL4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.18□□□□□ -0.46
Q3KNL4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.18□□□□□ -0.46
Q3KNL4 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.18□□□□□ -0.46
Q3KNL4 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.18□□□□□ -0.46
Q3KNL4 Gm24526-201ENSMUST00000082921 158 ntBASIC12.18□□□□□ -0.46
Q3KNL4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.18□□□□□ -0.46
Q3KNL4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q3KNL4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.18□□□□□ -0.46
Q3KNL4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3KNL4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
Q3KNL4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.18□□□□□ -0.46
Q3KNL4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Q3KNL4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3KNL4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3KNL4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.17□□□□□ -0.46
Q3KNL4 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3KNL4 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Q3KNL4 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Q3KNL4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3KNL4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3KNL4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms