Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Gm15610-201ENSMUST00000120584 195 ntBASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Gm6390-201ENSMUST00000215034 589 ntBASIC17.2■□□□□ 0.34
Trpm1Q2TV84 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trpm1Q2TV84 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Gm12663-201ENSMUST00000118481 958 ntBASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Gm28833-201ENSMUST00000189671 559 ntBASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Gm43380-201ENSMUST00000200421 220 ntBASIC17.19■□□□□ 0.34
Trpm1Q2TV84 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Gm18798-201ENSMUST00000187264 1700 ntBASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trpm1Q2TV84 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm14213-201ENSMUST00000119778 768 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm12274-201ENSMUST00000120062 385 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm5555-201ENSMUST00000120352 1111 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm12453-201ENSMUST00000121981 331 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 AC098716.1-201ENSMUST00000213527 703 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 AC130477.1-201ENSMUST00000226982 420 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm18642-201ENSMUST00000206642 1400 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm44260-201ENSMUST00000204946 2094 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Gm14005-208ENSMUST00000223654 681 ntBASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trpm1Q2TV84 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 AC158636.1-201ENSMUST00000220118 1393 ntBASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trpm1Q2TV84 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms