Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm15711-201ENSMUST00000118889 535 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm14247-201ENSMUST00000120950 237 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm18753-201ENSMUST00000201000 566 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm17827-201ENSMUST00000211825 742 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.92□□□□□ -0.5
Hoxc4Q08624 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxc4Q08624 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Gm26286-201ENSMUST00000104166 134 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Gm18734-201ENSMUST00000172937 808 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 Mir7677-201ENSMUST00000184226 67 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Gm43138-201ENSMUST00000199123 708 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 Nsd1-205ENSMUST00000224693 852 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.91□□□□□ -0.5
Hoxc4Q08624 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxc4Q08624 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms