Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm45177-201ENSMUST00000209104 2307 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm13916-201ENSMUST00000117368 628 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm14098-201ENSMUST00000119295 623 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm15103-201ENSMUST00000119893 871 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm24398-201ENSMUST00000157870 109 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Rprl1-201ENSMUST00000158050 327 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm18552-201ENSMUST00000187425 538 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm37852-201ENSMUST00000193027 350 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 BB187690-201ENSMUST00000198619 1176 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.43□□□□□ -0.42
Col9a1Q05722 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Gm7961-201ENSMUST00000201338 1436 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.43□□□□□ -0.42
Col9a1Q05722 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.43□□□□□ -0.42
Col9a1Q05722 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.43□□□□□ -0.42
Col9a1Q05722 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a1Q05722 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm11949-201ENSMUST00000117640 372 ntBASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm12736-201ENSMUST00000119330 236 ntBASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm8737-201ENSMUST00000122208 642 ntBASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm22121-201ENSMUST00000175148 54 ntBASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm8824-201ENSMUST00000182962 990 ntBASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm18799-201ENSMUST00000189104 913 ntBASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm19231-201ENSMUST00000193212 830 ntBASIC12.42□□□□□ -0.42
Col9a1Q05722 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.42□□□□□ -0.42
Col9a1Q05722 Gm17827-201ENSMUST00000211825 742 ntBASIC12.42□□□□□ -0.42
Col9a1Q05722 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col9a1Q05722 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC12.42□□□□□ -0.42
Col9a1Q05722 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.42□□□□□ -0.42
Col9a1Q05722 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a1Q05722 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms