Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VcpQ01853 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.29□□□□□ -0.28
VcpQ01853 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.29□□□□□ -0.28
VcpQ01853 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.29□□□□□ -0.28
VcpQ01853 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.29□□□□□ -0.28
VcpQ01853 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.29□□□□□ -0.28
VcpQ01853 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.29□□□□□ -0.28
VcpQ01853 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Gm4768-201ENSMUST00000206199 686 ntBASIC13.29□□□□□ -0.28
VcpQ01853 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.29□□□□□ -0.28
VcpQ01853 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.29□□□□□ -0.28
VcpQ01853 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.29□□□□□ -0.28
VcpQ01853 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.29□□□□□ -0.28
VcpQ01853 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
VcpQ01853 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.29□□□□□ -0.28
VcpQ01853 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcpQ01853 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.29□□□□□ -0.28
VcpQ01853 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.28□□□□□ -0.28
VcpQ01853 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.28□□□□□ -0.28
VcpQ01853 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm10434-201ENSMUST00000101158 471 ntBASIC13.28□□□□□ -0.28
VcpQ01853 Gm23270-201ENSMUST00000104055 131 ntBASIC13.28□□□□□ -0.28
VcpQ01853 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.28□□□□□ -0.28
VcpQ01853 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm18584-201ENSMUST00000203098 964 ntBASIC13.28□□□□□ -0.28
VcpQ01853 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.28□□□□□ -0.28
VcpQ01853 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.28□□□□□ -0.28
VcpQ01853 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm32025-201ENSMUST00000217960 307 ntBASIC13.28□□□□□ -0.28
VcpQ01853 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.28□□□□□ -0.28
VcpQ01853 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
VcpQ01853 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.28□□□□□ -0.28
VcpQ01853 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
VcpQ01853 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.28□□□□□ -0.28
VcpQ01853 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VcpQ01853 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.27□□□□□ -0.28
VcpQ01853 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VcpQ01853 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
VcpQ01853 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcpQ01853 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.27□□□□□ -0.28
VcpQ01853 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.27□□□□□ -0.28
VcpQ01853 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcpQ01853 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcpQ01853 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcpQ01853 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VcpQ01853 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.27□□□□□ -0.28
VcpQ01853 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VcpQ01853 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.27□□□□□ -0.28
VcpQ01853 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.27□□□□□ -0.29
VcpQ01853 Gm14704-201ENSMUST00000120300 874 ntBASIC13.27□□□□□ -0.29
VcpQ01853 Gm9550-201ENSMUST00000161130 862 ntBASIC13.27□□□□□ -0.29
VcpQ01853 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 AA914427-201ENSMUST00000193194 1166 ntBASIC13.27□□□□□ -0.29
VcpQ01853 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Gm44545-201ENSMUST00000208262 746 ntBASIC13.27□□□□□ -0.29
VcpQ01853 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.27□□□□□ -0.29
VcpQ01853 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
VcpQ01853 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms