Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Lig3P97386 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Gm37042-201ENSMUST00000193816 581 ntBASIC13.63□□□□□ -0.23
Lig3P97386 Gm43378-201ENSMUST00000199336 582 ntBASIC13.63□□□□□ -0.23
Lig3P97386 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.63□□□□□ -0.23
Lig3P97386 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.63□□□□□ -0.23
Lig3P97386 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.63□□□□□ -0.23
Lig3P97386 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lig3P97386 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lig3P97386 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.63□□□□□ -0.23
Lig3P97386 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.63□□□□□ -0.23
Lig3P97386 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.62□□□□□ -0.23
Lig3P97386 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.62□□□□□ -0.23
Lig3P97386 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.62□□□□□ -0.23
Lig3P97386 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Lig3P97386 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.62□□□□□ -0.23
Lig3P97386 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lig3P97386 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.62□□□□□ -0.23
Lig3P97386 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Lig3P97386 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Gm16202-201ENSMUST00000117532 544 ntBASIC13.62□□□□□ -0.23
Lig3P97386 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.62□□□□□ -0.23
Lig3P97386 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lig3P97386 Gm26956-201ENSMUST00000182176 986 ntBASIC13.62□□□□□ -0.23
Lig3P97386 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.62□□□□□ -0.23
Lig3P97386 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lig3P97386 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lig3P97386 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Lig3P97386 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.62□□□□□ -0.23
Lig3P97386 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.62□□□□□ -0.23
Lig3P97386 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lig3P97386 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.62□□□□□ -0.23
Lig3P97386 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lig3P97386 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lig3P97386 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Lig3P97386 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Gm15276-201ENSMUST00000145953 498 ntBASIC13.61□□□□□ -0.23
Lig3P97386 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Lig3P97386 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Lig3P97386 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.61□□□□□ -0.23
Lig3P97386 Gm38317-201ENSMUST00000195564 343 ntBASIC13.61□□□□□ -0.23
Lig3P97386 Gm44967-201ENSMUST00000207047 631 ntBASIC13.61□□□□□ -0.23
Lig3P97386 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.61□□□□□ -0.23
Lig3P97386 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.61□□□□□ -0.23
Lig3P97386 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lig3P97386 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms