Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC8.17□□□□□ -1.1
PrkdcP97313 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PrkdcP97313 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Mir341-201ENSMUST00000093593 96 ntBASIC8.17□□□□□ -1.1
PrkdcP97313 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Gm6210-201ENSMUST00000204734 1942 ntBASIC8.17□□□□□ -1.1
PrkdcP97313 Gm15549-201ENSMUST00000121595 622 ntBASIC8.17□□□□□ -1.1
PrkdcP97313 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Gm25872-201ENSMUST00000177784 100 ntBASIC8.17□□□□□ -1.1
PrkdcP97313 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC8.17□□□□□ -1.1
PrkdcP97313 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC8.17□□□□□ -1.1
PrkdcP97313 Gm7525-201ENSMUST00000219425 454 ntBASIC8.17□□□□□ -1.1
PrkdcP97313 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PrkdcP97313 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PrkdcP97313 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm8038-201ENSMUST00000164674 2044 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC8.16□□□□□ -1.1
PrkdcP97313 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm18256-201ENSMUST00000209087 907 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PrkdcP97313 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PrkdcP97313 Mir1249-201ENSMUST00000116791 98 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Gm13505-201ENSMUST00000121666 817 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC8.16□□□□□ -1.1
PrkdcP97313 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
PrkdcP97313 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm7572-201ENSMUST00000182616 766 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Gm7833-201ENSMUST00000183288 990 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PrkdcP97313 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm19863-201ENSMUST00000192480 2218 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 AC093022.4-203ENSMUST00000228523 2657 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm38103-201ENSMUST00000191707 864 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Gm2553-201ENSMUST00000215986 605 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Gm5040-201ENSMUST00000218609 800 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Gm8146-201ENSMUST00000192106 1847 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PrkdcP97313 AC154262.2-201ENSMUST00000224310 2293 ntBASIC8.16□□□□□ -1.1
PrkdcP97313 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC8.16□□□□□ -1.1
PrkdcP97313 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC8.15□□□□□ -1.1
PrkdcP97313 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC8.15□□□□□ -1.1
PrkdcP97313 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC8.15□□□□□ -1.1
PrkdcP97313 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC8.15□□□□□ -1.1
PrkdcP97313 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC8.15□□□□□ -1.1
PrkdcP97313 Gm6946-201ENSMUST00000182237 987 ntBASIC8.15□□□□□ -1.1
PrkdcP97313 Gm18124-201ENSMUST00000210695 706 ntBASIC8.15□□□□□ -1.1
PrkdcP97313 AC152169.1-201ENSMUST00000223901 701 ntBASIC8.15□□□□□ -1.1
PrkdcP97313 AC154305.2-201ENSMUST00000225813 901 ntBASIC8.15□□□□□ -1.1
PrkdcP97313 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PrkdcP97313 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms