Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H3f3aP84244 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
H3f3aP84244 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
H3f3aP84244 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
H3f3aP84244 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
H3f3aP84244 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
H3f3aP84244 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm15198-201ENSMUST00000117283 177 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Gm14999-201ENSMUST00000121039 624 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.07□□□□□ -0.64
H3f3aP84244 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm6621-201ENSMUST00000193251 772 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.07□□□□□ -0.64
H3f3aP84244 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.07□□□□□ -0.64
H3f3aP84244 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.07□□□□□ -0.64
H3f3aP84244 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
H3f3aP84244 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
H3f3aP84244 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H3f3aP84244 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H3f3aP84244 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.06□□□□□ -0.64
H3f3aP84244 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H3f3aP84244 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H3f3aP84244 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H3f3aP84244 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H3f3aP84244 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H3f3aP84244 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H3f3aP84244 Gm25214-201ENSMUST00000104573 129 ntBASIC11.06□□□□□ -0.64
H3f3aP84244 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.06□□□□□ -0.64
H3f3aP84244 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.06□□□□□ -0.64
H3f3aP84244 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.06□□□□□ -0.64
H3f3aP84244 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.06□□□□□ -0.64
H3f3aP84244 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Gm44124-201ENSMUST00000204159 472 ntBASIC11.06□□□□□ -0.64
H3f3aP84244 Gm45331-201ENSMUST00000209868 554 ntBASIC11.06□□□□□ -0.64
H3f3aP84244 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H3f3aP84244 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H3f3aP84244 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
H3f3aP84244 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms