Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm22175-201ENSMUST00000175007 78 ntBASIC10.43□□□□□ -0.74
SgcaP82350 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Gm19078-201ENSMUST00000206311 727 ntBASIC10.43□□□□□ -0.74
SgcaP82350 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.43□□□□□ -0.74
SgcaP82350 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SgcaP82350 Gm26035-201ENSMUST00000083065 308 ntBASIC10.43□□□□□ -0.74
SgcaP82350 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.43□□□□□ -0.74
SgcaP82350 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
SgcaP82350 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcaP82350 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
SgcaP82350 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.43□□□□□ -0.74
SgcaP82350 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.43□□□□□ -0.74
SgcaP82350 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SgcaP82350 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.43□□□□□ -0.74
SgcaP82350 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.42□□□□□ -0.74
SgcaP82350 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SgcaP82350 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SgcaP82350 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.42□□□□□ -0.74
SgcaP82350 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.42□□□□□ -0.74
SgcaP82350 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SgcaP82350 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Gm7063-201ENSMUST00000186840 981 ntBASIC10.42□□□□□ -0.74
SgcaP82350 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SgcaP82350 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.42□□□□□ -0.74
SgcaP82350 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.42□□□□□ -0.74
SgcaP82350 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SgcaP82350 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.42□□□□□ -0.74
SgcaP82350 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SgcaP82350 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.42□□□□□ -0.74
SgcaP82350 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SgcaP82350 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SgcaP82350 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SgcaP82350 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SgcaP82350 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.41□□□□□ -0.74
SgcaP82350 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.41□□□□□ -0.74
SgcaP82350 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SgcaP82350 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SgcaP82350 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms